FastQC 0.8.0


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License:
GPL
Category:
Math
Publisher:
Simon-Andrews
Size:
774 KB
Last Updated:
2013-12-10
Operating System:
Mac OS X
Price:
FREE
Download
Publisher's description - FastQC 0.8.0
 
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FastQC is an open source software that provide a simple way to do some quality control checks on raw sequence data coming from high throughput sequencing pipelines.

FastQC provides a modular set of analyses which you can use to give a quick impression of whether your data has any problems of which you should be aware before doing any further analysis.

Here are some key features of "FastQC":

· Import of data from BAM, SAM or FastQ files (any variant)
· Providing a quick overview to tell you in which areas there may be problems
· Summary graphs and tables to quickly assess your data
· Export of results to an HTML based permanent report
· Offline operation to allow automated generation of reports without running the interactive application

Requirements:

· Java

What`s New in This Release: [ read full changelog ]

· Made all graphs easier to interpret
· Added an option to analyse only mapped sequences from a BAM/SAM file
· Added an option to analyse two or more files in parallel


 

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